[gmx-users] strange but true : How to explain and avoid?

Justin Lemkul jalemkul at vt.edu
Tue Jul 8 03:11:50 CEST 2014



On 7/7/14, 9:06 PM, Chetan Mahajan wrote:
> Thanks, Justin and Roland. While 2>/dev/null/ at the end of gmxdump command
> removes that quote nicely, adding either of following commands fails. I am
> using gromacs 4.6.5.:
>
> Following did not work ( why? curious since above 2>/dev/null/ will
> suppress all errors getting displayed)
>
> 1. GMX_NO_QUOTES = 1
> gmxdump -f lnanop.xtc
>

Incorrect syntax.

export GMX_NO_QUOTES=1

> 2. gmxdump -f lnanop.xtc -quiet
>

The -quiet option will suppress quotes in 5.0, not 4.6.5, as Roland said.

-Justin

-- 
==================================================

Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

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