[gmx-users] scount.xvg analysis
jalemkul at vt.edu
Sun Jul 13 03:28:19 CEST 2014
On 7/12/14, 3:48 AM, elham tazikeh wrote:
> Dear Users
> i,d like to have a figure , *residue numbers* vs* the percent of
> alpha-helix, beta-sheet and other secondary structures*
> but i can not plot them...
> is there any way to solve my problem?
The .xpm file can be parsed with any scripting language you like to track the
occurrence of each type of secondary structure element per residue.
Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow
Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201
jalemkul at outerbanks.umaryland.edu | (410) 706-7441
More information about the gromacs.org_gmx-users