[gmx-users] energy help
ANDRES ADOLFO ORTEGA GUERRERO
andres.ortega at correounivalle.edu.co
Fri Jul 18 19:08:00 CEST 2014
Hi dear gromacs Users
I am dealing with a Coul SR energy problem, my system has an CNT , Water,
Ions , POPC and an ION CHANNEL, i have already equilibrating, the
Temperature and Pressure are OK, but when i run 10ns of MD, my Coul SR
CNT-CNT is really big,
Energy Average Err.Est. RMSD
Tot-Drift
Coul-SR:CNT-CNT -4.42286e+06 630 3566.46 -4250.92
(kJ/mol)
and this is wrong due to the CNT has no charges,
so i decided to make a new system with CNT and Water, and the Coul SR
CNT-CNT is 0, as is supposed to be, in order to see if maybe this was due
to my CNT.itp but is not, is ok , Could you maybe have an idea or an
opinion of what is going on with this, i just cant trust in the others
Energy, Thank You in Advance
Andrés
More information about the gromacs.org_gmx-users
mailing list