[gmx-users] Regarding membrane construction
jalemkul at vt.edu
Mon Jun 9 23:28:46 CEST 2014
On 6/9/14, 9:08 AM, Venkat Reddy wrote:
> Dear Justin,
> I have tried the command
> genbox -cp protein.gro -cs membrane.gro -o protein_in_membrane.gro
> but it got hanged. Is there something wrong with the command?
I wouldn't expect a hang as long as the box is set to appropriate dimensions.
The new box for the protein shouldn't be substantially larger than the membrane
Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow
Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201
jalemkul at outerbanks.umaryland.edu | (410) 706-7441
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