[gmx-users] virtual site independent from other structure

[Justin Lemkul]

On 6/11/14, 5:39 AM, Linlin Sun wrote:
> Hello everyone,
>
> I would like to create a virtual site which is independent from other
> structure. Is this possible?
>

No, virtual sites in Gromacs are always constructed relative to some defined atoms.

-Justin

-- 
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Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

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