[gmx-users] Interaction energy between helices

Natalia Alveal F. nalveal at bio.puc.cl
Thu Jun 12 00:10:08 CEST 2014

Dear Gromacs users,
I want to calculate the energy of interaction between two helices of a
protein, but g_energy dont have the option for -ndx file to select these
specific residues of a helix. How I can do this?

Thanks for your suggestions!

Natalia Alveal Fuentealba
Ingeniera en Bioinformática
Laboratory of Membranes Proteins Structure and Signalling
Departamento de Fisiología
Pontificia Universidad Católica de Chile
Alameda 340, Santiago, Chile
Fono: 56-2-3542877

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