[gmx-users] Interpreting energy drift
Chetan Mahajan
chetanvm10 at gmail.com
Mon Jun 23 02:26:52 CEST 2014
Dear All,
I want to know how to interpret differences in energy drift. I am comparing
energy drifts with respect to position restraints. In system 1, i have
following:
Energy Average Err.Est. RMSD Tot-Drift
-------------------------------------------------------------------------------
Position Rest. 6782.57 7.4 169.619 -54.0742
(kJ/mol)
In system 2, I have following:
Energy Average Err.Est. RMSD Tot-Drift
-------------------------------------------------------------------------------
Position Rest. 6748.74 22 165.176 -156.894
(kJ/mol)
So I understand that energy drift is a energy change artifact due to
numerical integration processes.
I am not sure about the ballpark values.
Which one in above is serious? why?
Thanks
Chetan
More information about the gromacs.org_gmx-users
mailing list