[gmx-users] dna with charmm36

Justin Lemkul jalemkul at vt.edu
Tue Mar 4 02:26:35 CET 2014

On 3/3/14, 8:13 PM, gromacs query wrote:
> Hi Justin
> Yes I chose termini 5TER or 3TER correctly but it only works fine when D*5
> replaced by D* and D*3 by D* otherwise it ends with errors as said
> previously.

As I would expect.  Specific D*5/D*3 names are for AMBER force fields only.



Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441


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