[gmx-users] Question for bdc = xy
jalemkul at vt.edu
Fri Mar 28 00:37:14 CET 2014
On 3/27/14, 7:31 PM, ookami a wrote:
> I want my system to be simulated in only two dimension periodic boundary
> condition. but for this one, after the pvt, everything spread in the whole
> box(where z_direction is 3 times the original length of the box) and the
> vacuum disappeared. so i think this system is still simulated with xyz
The only thing your results indicate is that the molecules in it diffused to
fill the available volume.
Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow
Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201
jalemkul at outerbanks.umaryland.edu | (410) 706-7441
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