[gmx-users] forming disulfide linkage between two chains

tasneem kausar tasneemkausar12 at gmail.com
Wed Aug 5 09:52:55 CEST 2015


I am trying to make disulfide linkage between chain A and B.
The command line is "pdb2gmx -f prtn.pdb -o prtn.gro -p prtn.top -ss.
I have used -ss option of pdb2gmx but disufide linkage is not formed
between the chains A and B.
What is the possible way to form the disulfide linkage in Gromacs usind the
Please resolve the issue

Thanks in Advance

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