[gmx-users] Pdb file

[Mark Abraham]

Hi,

When can a single argon-argon interaction have a negative potential energy?

Mark

On Wed, Aug 12, 2015 at 4:37 AM Sunil Ghimire <ghimiresunil48 at gmail.com>
wrote:

> I created the pdb file by genconf but the system was not minimized, i got
> positive potential energy. What may be the problem?
> On 11 Aug 2015 19:38, "Mark Abraham" <mark.j.abraham at gmail.com> wrote:
>
> > Hi,
> >
> > gmx genconf on a small box with a single argon is a useful starting
> point.
> >
> > Mark
> >
> > On Tue, Aug 11, 2015 at 3:16 PM Sunil Ghimire <ghimiresunil48 at gmail.com>
> > wrote:
> >
> > > How can  i create the .pdb file for 1600 atoms of argon ?
> > > --
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