[gmx-users] bonded parameter

حسن هاشم زاده hashemzadehassan at gmail.com
Wed Aug 12 19:56:49 CEST 2015


but I delete bonded parameter from my force field in spite of this topology
file was created  and all step is runing without any error

2015-08-12 21:56 GMT+04:30 Maryam Kowsar <maryam.kowsar at gmail.com>:

> Hi Hassan,
> For making a topology(.top) file all parameters of your forcefield is
> needed.
>
> On Wed, Aug 12, 2015 at 9:37 PM, حسن هاشم زاده <hashemzadehassan at gmail.com
> >
> wrote:
>
> > Hi
> >
> > ?Which step of simulation the bonded parameters of available in a force
> > field will be used
> > --
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