[gmx-users] em.gro file doesnt show a reasonable structure in VMD

[Mark Abraham]

Hi,

Not with that little information. Is the starting structure reasonable?
Upload a screenshot to a file sharing service and show us what you think is
unreasonable :-)

Mark

On Tue, Aug 25, 2015 at 12:16 PM faride badalkhani <
farideh.khamseh at gmail.com> wrote:

> Dear gmx users,
>
> I have perform an energy minimization on my system and the potential per
> step plot has a normal appearance, but the em.gro file doesn't show a
> reasonable structure in VMD. Could you tell me why this happened?
>
>
> Regards,
> Farideh
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