[gmx-users] Helicity over simulation time?

Rajiv rajiv at kaist.ac.kr
Wed Aug 26 04:20:25 CEST 2015

Dear all,

I have performed 200ns simulation for a protein and wants to plot a helicity over simulation time. 
After reading few queries, i have done do_dssp and obtained the scount.xvg which has the all secondary structure as a function time. 

I wonder, how do i only obtain the helicity over function of time as i want to plot the probability distribution of helicity.

Thank you all.

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