[gmx-users] Fwd: NO BONDS IN TOPOLOGY FILES

Alex Cullen cullena2010 at gmail.com
Mon Aug 31 10:03:27 CEST 2015


Dear gmx-users,

I am simulating a polymer, and I am really beginner in this area. when I
execute pdb2gmx command I get posre.itp, topol.top, and conf.gro files, but
there are no bonded, angles, and dihedral interactions in the topology
file, only atoms and their chrges for each residue!
I will appreciate your help.

Regards,
Alex


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