[gmx-users] Fwd: NO BONDS IN TOPOLOGY FILES

[Alex Cullen]

Dear gmx-users,

I am simulating a polymer, and I am really beginner in this area. when I
execute pdb2gmx command I get posre.itp, topol.top, and conf.gro files, but
there are no bonded, angles, and dihedral interactions in the topology
file, only atoms and their chrges for each residue!
I will appreciate your help.

Regards,
Alex