[gmx-users] Umbrella Samling Alteration

Alexander Law alexander.law at pg.canterbury.ac.nz
Mon Feb 2 12:39:28 CET 2015


Dear Gromacs Users

I am currently running the series of simulations using the following command:

mdrun -deffnm umbrella0 -pf pullf-umbrella0.xvg -px pullx-umbrella0.xvg

I wish to lessen the amount of time for each of these simulations from 10 ns to 6 ns. These simulations are already up to around 5 ns, is it possible to change the time to 6 ns without altering the md_umbrella.mdp file and starting agin? Also, will this reduction have any major impacts on the quality/efficacy of the data?

Many Thanks,
Alex

This email may be confidential and subject to legal privilege, it may
not reflect the views of the University of Canterbury, and it is not
guaranteed to be virus free. If you are not an intended recipient,
please notify the sender immediately and erase all copies of the message
and any attachments.

Please refer to http://www.canterbury.ac.nz/emaildisclaimer for more
information.


More information about the gromacs.org_gmx-users mailing list