[gmx-users] Problem with Lysozyme in Water Tutorial

[HANNIBAL LECTER]

It just means you either missed grompp "-f ions.mdp" ...

OR

the ions.mdp file is not there in the directory where you are performing
your simulations.

On Mon, Feb 2, 2015 at 12:10 PM, Stephen P. Molnar <s.molnar at sbcglobal.net>
wrote:

> I have installed v-5.0.4 in Debian Wheezy without any warning or erroe
> messages.
>
> I have tried running the Lysozyme in Water Tutorial ( the one written for
> v-5) and have generated an error message in Step 4.
>
> The message is:
>
> File input/output error:
> ions.mdp
> For more information and tips for troubleshooting, please check the GROMACS
> website at http://www.gromacs.org/Documentation/Errors
>
> I checked the reference and did not find one [defaults] directive in the
> .itp file, let alone two
>
> Pleas advise.
>
> Thanks in advance.
>
> --
> Stephen P. Molnar, Ph.D.                 Life is a fuzzy set
> Foundation for Chemistry                 Stochastic and Multivariate
> www.FoundationForChemistry.com
> (614)312-7528(c)
> Skype:  smolnar1
>
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