[gmx-users] several runs

[Mark Abraham]

Hi,

The "interference" is just that the runs will be ridiculously slow. You
want either to arrange life to run one simulation at a time, or manually
allocate cores to separate simulations, e.g. as described at
http://www.gromacs.org/Documentation/Acceleration_and_parallelization#Pinning_threads_to_physical_cores

Mark

On Tue, Feb 24, 2015 at 8:40 PM, mah maz <mahmaz71 at gmail.com> wrote:

> Hi Justin,
> Thank you for your answer! If you may help with any of these questions I
> would be greatly grateful;
> How can I understand if they were interfered? How is pinning? Any other
> ways you can recommend?
>
> Thanks a lot
>
> On Tue, Feb 24, 2015 at 10:14 PM, mah maz <mahmaz71 at gmail.com> wrote:
>
> > Is running simulations in several terminals problematic?
> >
> > On Tue, Feb 24, 2015 at 8:42 PM, mah maz <mahmaz71 at gmail.com> wrote:
> >
> >> Dear all,
> >>
> >> How can I perform several simulations simultaneously (in linux)?
> >>
> >> thank you!
> >>
> >
> >
> --
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