[gmx-users] Interface/buried erea

[Saman Shahriyari]

Dear usersI am trying to calculate the interface/buried surface between two chains of a multichain protein by gromacs5. should I be using sasa commands? if so, should I be finding the result of "chainA_SASA + chainB_SASA - ((chainA + chainB)SASA)" equation?if so, which groups should I be choosing as the first and second groups, after the execution of SASA command?Regards,Saman