[gmx-users] Error : Atomtype not found

protim chakraborti protimster at gmail.com
Thu Jan 8 16:14:40 CET 2015


Respected Dr. Lemkul
Thanks for the suggestion. I have checked the ffnonbonded.itp and found
that copper is entered out there in the following form and format

; Ions and noble gases (useful for tutorials)
Cu2+    29      63.54600        2.00    A       2.08470e-01     4.76976e+00
Ar      18      39.94800        0.00    A       3.41000e-01     2.74580e-02

would this be not be suffice or i need to add Cu separately? or may be I
have to run starting from pdb2gmx itself!

Regards

-- 
Pratim Chakraborti
+919831004707


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