[gmx-users] segfault in g_clustsize

Mark Abraham mark.j.abraham at gmail.com
Wed Jan 21 01:22:10 CET 2015


On Tue, Jan 20, 2015 at 10:54 PM, Dr. Vitaly Chaban <vvchaban at gmail.com>
wrote:

> Mark - I could have said this myself...


Sure, but there's lots of things you could have said that someone who might
possibly be able to help can't know. Gromacs version, command line,
simulation contents, what visualization shows... you know the drill! ;-)

It reports segfault when the system
> contains just a single cluster, but in that case the output files are
> created and contain numerical data. In my current case, the files are
> created but do not contain anything. - Vitaly
>

I don't understand. I thought your "current case" was segfaulting.

Mark


>
>
> On Tue, Jan 20, 2015 at 5:58 PM, Mark Abraham <mark.j.abraham at gmail.com>
> wrote:
>
> >
> >
> > On Tue, Jan 20, 2015 at 8:11 PM, Dr. Vitaly Chaban <vvchaban at gmail.com>
> > wrote:
> >
> >> What can segmentation fault in g_clustsize indicate?
> >>
> >
> > Usage error, coding error, or insufficient resources. Hard to say which,
> > on the information you've given ;-)
> >
> > Mark
> >
> >
> >> The error occurs irrespective of which atom type for clustering we
> select.
> >> --
> >> Gromacs Users mailing list
> >>
> >> * Please search the archive at
> >> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> >> posting!
> >>
> >> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
> >>
> >> * For (un)subscribe requests visit
> >> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> >> send a mail to gmx-users-request at gromacs.org.
> >>
> >
> >
> --
> Gromacs Users mailing list
>
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> send a mail to gmx-users-request at gromacs.org.
>


More information about the gromacs.org_gmx-users mailing list