[gmx-users] bend angles of a kink motif

[Justin Lemkul]

On 6/1/15 12:19 PM, h.alizadeh at znu.ac.ir wrote:
> Dear Users
>
> Can we calculate the bend angle of a kink motif in an alpha helix from a .xtc file?
>

gmx angle calculates angles, as the name implies.  There are also a number of 
programs that calculate helix properties.  See the manual.

-Justin

-- 
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Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 629
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

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