[gmx-users] Microwave

[David van der Spoel]

On 02/06/15 14:07, Justin Lemkul wrote:
>
>
> On 6/2/15 4:31 AM, Mostafa Javaheri wrote:
>> Dear Justin,
>>
>> How could I simulate a membrane protein while there is microwave
>> radiations in
>> one direction e.g. in direction of z-axis? Should I change the
>> delta-lambda
>
> delta-lambda is a free energy option.
>
>> or Is this accessible via electric field option? If I have to use
>> electric
>> field option, should I patch the mdrun (
>> http://www.gromacs.org/Developer_Zone/Programming_Guide/Patching_mdrun)?
>>
>
> Electric fields are already supported, but I don't think this is
> physically what you want.  I have no idea how to microwave an MD
> simulation.
The wave length in a microwave oven is ~1-10 cm.

>
> -Justin
>


-- 
David van der Spoel, Ph.D., Professor of Biology
Dept. of Cell & Molec. Biol., Uppsala University.
Box 596, 75124 Uppsala, Sweden. Phone:	+46184714205.
spoel at xray.bmc.uu.se    http://folding.bmc.uu.se