[gmx-users] does gromos force field support implicit solvent?

Mark Abraham mark.j.abraham at gmail.com
Wed Jun 3 08:00:46 CEST 2015


Hi,

Probably not - it wasn't parameterised for such usage, and any such
re-deployment would require careful validation . Your background reading on
your choice of model physics is your best guide to doing good physics. :-)

Mark

On Wed, 3 Jun 2015 07:55 Ming Tang <m21.tang at qut.edu.au> wrote:

> Dear gromacs experts,
>
> I tried to  use gromos 54a7 force field to calculate persistence length of
> a helix in implicit solvent, but got GB parameters missing errors. When I
> tried to modify the implicit_genborn_params section, I found there is not
> gbsa.itp file in gromos54a7.ff
> does gromos force field support implicit solvent calculation?
>
> Thanks.
> --
> Gromacs Users mailing list
>
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> send a mail to gmx-users-request at gromacs.org.
>


More information about the gromacs.org_gmx-users mailing list