[gmx-users] Biphasic Systems for BSA

[James Lord]

Hi all,
I have a trivial question, What is the best box type and size for a big
protein such as BSA (attached .pdb) to minimize computational cost? what is
the rule of thumb re the protein distance to box wall?
This protein is around 16 nm in x direction and 6nm in y.
https://drive.google.com/file/d/0B0YMTXH1gmQsdGd2Z2xtVENzZkk/view?usp=sharing

Cheers
James