[gmx-users] VOlume of box
Tsjerk Wassenaar
tsjerkw at gmail.com
Tue Jun 30 13:44:19 CEST 2015
Hi Anik,
In NVT the box doesn't change. The volume of the box is the product of the
first three numbers of the last line of a GRO file. gmx energy can also
extract the system volume if you run in NpT.
Cheers,
Tsjerk
On Tue, Jun 30, 2015 at 11:21 AM, Anik Sen <anik.sen at kemi.uu.se> wrote:
> Dear Sir,
> I am using the latest version of GROMACS, with TIP4P
> solvent model and AMBER03 forcefield for my calculations. Does the program
> changes the box size or volume after a complete run of MD.
> I used NPT ensemble for the equilibration steps and NVT ensemble for the
> production run.
>
> How can I check the latest box volume.
>
> With regards..
> Anik
>
> Dr. Anik Sen,
> Post Doctoral Fellow,
> Ångströmlaboratoriet- Uppsala Universitet
> Box 538
> SE-751 21 Uppsala
> Sweden
> Phone no:- +46-722781705
> --
> Gromacs Users mailing list
>
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> send a mail to gmx-users-request at gromacs.org.
>
--
Tsjerk A. Wassenaar, Ph.D.
More information about the gromacs.org_gmx-users
mailing list