[gmx-users] Problem in installation

Zhe Liu starship at mail.ustc.edu.cn
Fri May 1 17:46:44 CEST 2015


Dear All,


           I am a new user for  GROMACS, and I meet one problem when installing the code.
   When I run  
           cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON
  
   I obtain the following errors:
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
   -- No compatible CUDA toolkit found (v4.0+), disabling native GPU acceleration
       -- Boost version: 1.54.0
-- The GROMACS-managed build of FFTW 3 will configure with the following optimizations: --enable-sse2
Downloading: http://gerrit.gromacs.org/download/regressiontests-5.0.4.tar.gz
-- [download 100% complete]
CMake Error at tests/CMakeLists.txt:58 (message):
  error: downloading
  'http://gerrit.gromacs.org/download/regressiontests-5.0.4.tar.gz' failed


  status_code: 7


  status_string: "Couldn't connect to server"


  log: Hostname was NOT found in DNS cache


    Trying 130.237.25.133...


  Connected to gerrit.gromacs.org (130.237.25.133) port 80 (#0)


  GET /download/regressiontests-5.0.4.tar.gz HTTP/1.1


  User-Agent: curl/7.35.0


  Host: gerrit.gromacs.org


  Accept: */*


  


  HTTP/1.1 302 Found


  Date: Fri, 01 May 2015 15:20:54 GMT


  Server Apache/2.2.22 (Ubuntu) is not blacklisted


  Server: Apache/2.2.22 (Ubuntu)


  Location: https://kth.box.com/shared/static/53xl0qouhsvrbrbgtl4p.gz


  Vary: Accept-Encoding


  Content-Length: 325


  Content-Type: text/html; charset=iso-8859-1


  


  Ignoring the response-body


  <!DOCTYPE HTML PUBLIC "-//IETF//DTD HTML 2.0//EN">


  <html><head>


  <title>302 Found</title>


  </head><body>


  <h1>Found</h1>


  <p>The document has moved <a
  href="https://kth.box.com/shared/static/53xl0qouhsvrbrbgtl4p.gz">here</a>.</p>




  <hr>


  <address>Apache/2.2.22 (Ubuntu) Server at gerrit.gromacs.org Port
  80</address>


  </body></html>


  Connection #0 to host gerrit.gromacs.org left intact


  Issue another request to this URL:
  'https://kth.box.com/shared/static/53xl0qouhsvrbrbgtl4p.gz'


  Hostname was NOT found in DNS cache


    Trying 74.112.184.85...


  Connected to kth.box.com (74.112.184.85) port 443 (#1)


  successfully set certificate verify locations:


    CAfile: none
    CApath: /etc/ssl/certs


  SSLv3, TLS handshake, Client hello (1):




-- Configuring incomplete, errors occurred!
See also "/home/zheliu/gromacs-5.0.4/build/CMakeFiles/CMakeOutput.log".
See also "/home/zheliu/gromacs-5.0.4/build/CMakeFiles/CMakeError.log".


----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
It seems that some part of the code cannot be downloaded.
Could someone help me to deal with this?


I really appreciate any help you can provide.


--
Best Wishes
--
*******************************************************************
 
 Zhe Liu
 Ph.D. Candidate, Nuclear Fuel Cycle and Materials
 School of Nuclear Science & Technology
 University of Science & Technology of China
 No.443 Huangshan Road, Hefei, Anhui, 230027
 P.R. China
 Tel: +86 136-6551-9817  Email: starship at mail.ustc.edu.cn    
     
             

********************************************************************


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