[gmx-users] During mdrun my protein moves towards edges

Seera Suryanarayana palusoori at gmail.com
Mon May 11 10:59:13 CEST 2015

Dear gromacs users

I have been running the real mdrun after equilibration. mdrun has been
submitted for 500ns. After some time(150ns) the protein moves towards
edges. I want the internal moments only, but whole protein moves all sides
of box rather than at centre of the box. Kindly tell me how to overcome
above mentioned problem and what could be the reason?

Thanks in Advance
Graduate student

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