andrew.bostick1 at gmail.com
Mon May 11 20:34:44 CEST 2015
Dear gromacs users
I have experience in MD simulation of protein and peptides by gromos force
Now I am working on a new project in which I should connect two peptides
(based on experimental data) to obtain one new peptide. This connection is
CD atom of GLU residue from peptide 1 and NZ atom of LYS residue from
1) How to make this connection (which software) to gromacs recognize this
2) Should I need to change force field parameters?
3) Should I define new residue containing Glu-Lys?
Any help will highly appreciated.
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