[gmx-users] question

Sun May 17 16:43:40 CEST 2015

Dear Justin

Thanks for your answer.

At first, I installed cmake 2.8.8 on centOS, by following commands:

./bootstrap; gmake; make install

Then I used *Quick and dirty *installation
<http://www.gromacs.org/Documentation/Installation_Instructions_5.0?highlight=installation#TOC>
 instruction.

When I used
cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON

I encountered with:

[root at lbm build]# cmake .. -DGMX_BUILD_OWN_FFTW=ON
-DREGRESSIONTEST_DOWNLOAD=ON CUDA_TOOLKIT_ROOT_DIR not found or specified
-- Could NOT find CUDA (missing: CUDA_TOOLKIT_ROOT_DIR CUDA_NVCC_EXECUTABLE
CUDA_INCLUDE_DIRS CUDA_CUDART_LIBRARY) (Required is at least version "4.0")
-- No compatible CUDA toolkit found (v4.0+), disabling native GPU
acceleration -- The GROMACS-managed build of FFTW 3 will configure with the
following optimizations: --enable-sse2 Downloading:
http://gerrit.gromacs.org/download/regressiontests-5.0.5.tar.gz --
[download 100% complete] CMake Error at tests/CMakeLists.txt:57 (message):
error: downloading '
http://gerrit.gromacs.org/download/regressiontests-5.0.5.tar.gz' failed
status_code: 1 status_string: "unsupported protocol" log: About to
connect() to gerrit.gromacs.org port 80 (#0) Trying 130.237.25.133...
connected Connected to gerrit.gromacs.org (130.237.25.133) port 80 (#0) GET
/download/regressiontests-5.0.5.tar.gz HTTP/1.1 Host: gerrit.gromacs.org
Accept: */* HTTP/1.1 302 Found Date: Sun, 17 May 2015 14:37:01 GMT Server:
Apache/2.2.22 (Ubuntu) Location:
https://kth.box.com/shared/static/ft4o4qpm318vsrori35sqhcuv5w6qjnu.gz Vary:
Accept-Encoding Content-Length: 337 Content-Type: text/html;
charset=iso-8859-1 Ignoring the response-body <!DOCTYPE HTML PUBLIC
"-//IETF//DTD HTML 2.0//EN"> <html><head> <title>302 Found</title>
</head><body> <h1>Found</h1> <p>The document has moved <a href="
https://kth.box.com/shared/static/ft4o4qpm318vsrori35sqhcuv5w6qjnu.gz">here</a>.</p>
<hr> <address>Apache/2.2.22 (Ubuntu) Server at gerrit.gromacs.org Port
80</address> </body></html> Connection #0 to host gerrit.gromacs.org left
intact Issue another request to this URL: '
https://kth.box.com/shared/static/ft4o4qpm318vsrori35sqhcuv5w6qjnu.gz'
libcurl was built with SSL disabled, https: not supported! unsupported
protocol Closing connection #0 -- Configuring incomplete, errors occurred!

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What is wrong in my installation steps? Thanks in advance.