[gmx-users] Query

[Priya Das]

Dear all,

While generating RMSD plots of protein in presence of ligand, i am getting
a RMSD of around 4.5 Angstrom around 10 ns after which the system is almost
stable.
Is it an acceptable RMSD?
What is the acceptable range for RMSD for structures?
-- 
*Let us all join hands to save our " Mother Earth"*
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Regards,
Priya Das
Research Scholar
Dept. of Computational Biology and Bioinformatics,
University of Kerala