[gmx-users] using charmm36 force field with gromacs

Erik Marklund erik.marklund at chem.ox.ac.uk
Tue Nov 3 23:53:52 CET 2015





Use constraints = h-bonds

You'll get incorrect balance of 1-4 interactions if you constrain all bonds with CHARMM.

Interesting. Can you please elaborate Justin?

Kind regards,
Erik


lincs_iter    = 1                    ; accuracy of LINCS
lincs_order    = 4                    ; also related to accuracy
--
==================================================

Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 629
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu<mailto:jalemkul at outerbanks.umaryland.edu> | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

==================================================
--
Gromacs Users mailing list

* Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting!

* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists

* For (un)subscribe requests visit
https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-request at gromacs.org<mailto:gmx-users-request at gromacs.org>.



More information about the gromacs.org_gmx-users mailing list