[gmx-users] Fw: InflateGRO script in KALP in DPPC tutorial

Justin Lemkul jalemkul at vt.edu
Sun Oct 4 21:39:43 CEST 2015



On 10/4/15 2:02 PM, ‪neda razavi‬ ‪ wrote:
> Hello every body
>
>
> I read in InflateGRO file that : [ A distance cutoff in A can be defined : only lipids with a P-cA distance exceeding that cutoff will be written. ]  i want to know WHY???? and P-CA distance is from one lipid or two lipids??and P refers to p-atom or protein molecule??what is alpha-carbon in Phospolipids?
> thank you very much
>

Please read dx.doi.org/10.1016/j.ymeth.2006.08.006 and do not spam the list with 
the same question repeatedly.

-Justin

-- 
==================================================

Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 629
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

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