[gmx-users] RMSF calculation of carbon alpha

Ebert Maximilian m.ebert at umontreal.ca
Mon Oct 5 20:46:44 CEST 2015

Hi there,

I want to calculate ht RMSF of the carbon alpha. First which atoms are used if I calculate the RMSF per residue with -res and how can I calculate the RMSF of carbon alpha or NH vector etc? Can’t seem to find an input except for the group of the alignment for the -fit 

Thank you,


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