[gmx-users] RMSF calculation of carbon alpha

[Ebert Maximilian]

Hi there,

I want to calculate ht RMSF of the carbon alpha. First which atoms are used if I calculate the RMSF per residue with -res and how can I calculate the RMSF of carbon alpha or NH vector etc? Can’t seem to find an input except for the group of the alignment for the -fit 

Thank you,

Max