[gmx-users] Normal Mode Analysis

Dan Sponseller gromacs at danpeg.com
Wed Oct 14 19:49:09 CEST 2015


I am trying to do a Normal Mode Analysis of a polymer in water. I am running my minimization right now with -DFLEXIBLE defined.

How do I exclude the water from the analysis. I only want the analysis done on the polymer.

Dan Sponseller
PhD student, George Mason University

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