[gmx-users] Building a box
Tsjerk Wassenaar
tsjerkw at gmail.com
Fri Oct 16 19:19:41 CEST 2015
Hi Thomas,
You can build a box by specifying vector lengths and angles: gmx editconf
-box ... -angles ... . Mind that you don't have full freedom like that, as
the box matrix will be upper triangular and reduced (the projection of a
later vector on a previous may not be larger than half that vector). But
any lattice/box can be rotated and deskewed to meet these criteria.
Hope it helps,
Tsjerk
On Oct 16, 2015 6:41 PM, "thomas knitter" <silkweaver35 at gmail.com> wrote:
> Hi there,
>
> Is there anyway that I could build a box which has different lengths in all
> directions like that below:
>
> a11 a12 a13
> a21 a22 a23
> a31 a32 a33
>
> Thanks
> --
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