[gmx-users] frequency of contact between all residue pairs
dmirij at brandeis.edu
Wed Oct 21 16:56:15 CEST 2015
I need to calculate the contact frequence between all pairs of residues in
my protein within a certain cutoff. I was trying to figure out a way to do
this with g_mindist. But I have not been able to get it do what I want.
Can someone tell me what is the best way to calculate the contact frequence
between all residues from a trajectory?
Thank you so much.
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