[gmx-users] Full topology from pdf2gmx

Eric Smoll ericsmoll at gmail.com
Wed Aug 3 17:18:06 CEST 2016


Hello GROMACS users,

Pdb2gmx generates a topology without parameters under directives like
bonds, angles, etc. This is because it references information in the
specified forcefield database. Is it possible to generate a fully populated
topology with force constants, equilibrium distances, etc.?

Best,
Eric


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