[gmx-users] umbrella sampling pull to -z direction

Nikhil Maroli scinikhil at gmail.com
Fri Aug 19 14:00:31 CEST 2016


Dear all,
I wanted to do an US of a protein-ligand system, my ligand is situated on
-z direction as in Fig (below link)


if I change the option

pull_coord1_dim         = N N Y


to

pull_coord1_dim         = N N -Y


it will work or is ther any way to deal in this situations?


https://drive.google.com/file/d/0BxaQk_pcR9viQ3hiWkNXNGZSbzg/view?usp=sharing


Thanks
-- 
Regards,
Nikhil Maroli


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