[gmx-users] GROMACS performance :installation
pall.szilard at gmail.com
Mon Aug 22 16:25:35 CEST 2016
What do you want to do? For single node runs, except multi-runs, you
do not need MPI.
On Thu, Aug 18, 2016 at 6:03 PM, Nikhil Maroli <scinikhil at gmail.com> wrote:
> Dear all,
> We have following workstations
> 2 x 12 core processor + 3 x GTX 980 Ti
> 2 x 12 core processor + 3 x GTX 1070
> 2 x 8 core processor + 2 xGTX 1070 and Tesla K20
> and a Desktop system with Single i7 processor (8 core) + GTX 1070
> Previously I installed with flag DGMX_GPU=ON
> -DCUDA_TOOLKIT_ROOT_DIR=/usr/local/cuda (8 core System with tesla k20)
> i used to run single job;
> gmx mdrun -nt X -deffnm XX -gpu_id 0
> can I proceed with the same installation set for the above systems? or
> should I compile with CUDA+MPI? or any other options?
> I planned to run at least two Gromacs jobs in one workstation ,Which will
> give the best performance.?
> Nikhil Maroli
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