[gmx-users] Any update on constant pH simulation?

Ullmann, Thomas thomas.ullmann at mpibpc.mpg.de
Tue Aug 23 10:08:58 CEST 2016


Hi Jagannath,

The current implementation an older GROMACS version (3.3.1) can in principle be used, but is
slow for systems with many titratable sites na d has some other restrictions. You find it here:
http://www.mpibpc.mpg.de/grubmueller/constpH

The new constant pH framework will offer higher flexibility and performance but still need some
time. The project website can be found here:
http://www.mpibpc.mpg.de/grubmueller/sppexa

Best,
Thomas.


--------------------------------------------------------------------------------------------------------------------------
R. Thomas Ullmann, PhD
Theoretical & Computational Biophysics
Max Planck Institute for Biophysical Chemistry
Am Fassberg 11
37077 Göttingen, Germany
thomas.ullmann at mpibpc.mpg.de
www.bisb.uni-bayreuth.de/People/ullmannt
--------------------------------------------------------------------------------------------------------------------------

________________________________________
From: gromacs.org_gmx-users-bounces at maillist.sys.kth.se [gromacs.org_gmx-users-bounces at maillist.sys.kth.se] on behalf of Jagannath Mondal [jmondal.backup at gmail.com]
Sent: Tuesday, August 23, 2016 6:41 AM
To: gmx-users at gromacs.org
Subject: [gmx-users] Any update on constant pH simulation?

Dear Gromacs users and developers
  Is there any new update on implementation of constant pH simulations on
recent gromacs version?
I am aware of the gromacs faq
http://www.gromacs.org/Documentation/How-tos/Constant_pH_Simulation
But I wanted to check if there is any update on this ?
Jagannath
--
Gromacs Users mailing list

* Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting!

* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists

* For (un)subscribe requests visit
https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-request at gromacs.org.


More information about the gromacs.org_gmx-users mailing list