[gmx-users] I have questions for tabulated bonded potentials

Chang Woon Jang changwoonjang at gmail.com
Tue Aug 30 22:31:46 CEST 2016


Dear Gromacs Users,

    I have several bond, angle, dihedral potentials named table_b1.xvg,
table_b2.xvg, table_b3.xvg ...table_a1.xvg, table_a2.xvg ... table_d1.xvg,
table_d2.xvg, table_d3.xvg, table_d4.xvg.

    In my system, there are 6 types of beads (A, B, C, D, E, F). How can I
assign each potential table to specific interactions. For example,
table_b1.xvg is A-B bond interaction, table_a1.xvg is A-B-A angle
interactions end so on.

    Thank you.


Best regards,
Changwoon Jang,


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