[gmx-users] g-membed +KALP in dppc

[Justin Lemkul]

On 1/12/16 3:13 PM, ‪neda razavi‬ ‪ wrote:
> dear admins i read in kalp in dppc tutorial that we should define an strong position restrain for protein in order to use inflateGRO. I wonder to know whether we should use this strong position restraint for protein when using g_membed or not?
>

These are two separate protocols that have their own instructions.  Read the 
g_membed paper and the corresponding GROMACS documentation; everything you need 
to know is there.

-Justin

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Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 629
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

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