[gmx-users] Rmsd Problem

Abid Channa abid_channa04 at yahoo.com
Tue Mar 22 11:48:14 CET 2016

Deaer Gromacs users, 

I have a problem in analyzing my MD simulation results of RMSD the graph of apo protein lies below while the graph lines of ligand bound complexes lies above.I am not getting what this graph is showing.
Kindly give me some clues to interpret this graph.
Here I am attaching the picture of this graph.


More information about the gromacs.org_gmx-users mailing list