[gmx-users] About RNA simulation

[柳青]

hello, everyone,


       I wanted to simulate a dsRNA(PDB ID:2MVY) by using gromos53a6, but  failed at pdb2gmx. The error information said:


                   Fatal error:

                   atom N not found in buiding block 1GUA while combining tdb and rtp

                   For more information and tips for troubleshooting, please check the GROMACS

       I had made the nucleotide name agree with the rtp file. Can you help me?Thank you.




    Qing Liu