[gmx-users] simulation_time

Ms. Nikita Bora niki24 at tezu.ernet.in
Sat May 14 08:54:01 CEST 2016


Respected Sir,

Recently i followed your tutorial for simulation of a 50 ns final mdrun of
protein-ligand complex where the value of rvdw=rcoulomb=1.4 was used. The
simulation runned at aorund 10 ns/day . While for the same  complex when
rvdw=rcoulomb=1 is made the run was 10 ns/day.

Sir i would like to know is there any standard value for rvdw,rcoulomb and
why a longer time is taken for 1.4 value


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