[gmx-users] (no subject)

Tsjerk Wassenaar tsjerkw at gmail.com
Sat May 14 08:54:14 CEST 2016

Hi Upasana,

What is your goal, your research objective? 'opening it for docking
purpose' is way too vague for us to help you, other then suggesting that
you are probably not choosing an optimal approach.


On May 14, 2016 07:04, "Upasana Ray" <upasanaray117 at gmail.com> wrote:

> Dear  user,
>  I have generated my final protein.pdb file by using trjconv command from
> .xtc file. The size of my pdb file is 0.98 GB, so whenever I am opening it
> for docking purpose my computer is freezing. Now how can I reduce my pdb
> file size  from GB to MB for using it properly. please help me to deal
>  with this problem.
> --
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