[gmx-users] amidated C-terminal residue of peptide

[kamakshi sikka]

Hello all,

I am doing  membrane peptide simulation studies using POPS/POPC membrane
built by Charmm GUI. While generating the topology file for the amidated
peptide, I get a fatal error:                '*Residue 'NHE' not found in
residue topology database'*. I am using Charmm36 force field here. Can you
please help me in solving this issue.

Regards
kamakshi sikka