[gmx-users] Strange in PMF calculation

Justin Lemkul jalemkul at vt.edu
Tue Nov 22 21:25:26 CET 2016



On 11/22/16 3:14 PM, Li, Shi wrote:
> Dear Gromacs users,
>
> I am doing some PMF simulations of 2 molecules in vacuum and my resulting
> profile has a strange look. I attached an eps files here, anyone can give
> me some suggestion on why there is fluctuation at longer distance?
>

The mailing list does not accept attachments.  Upload an image to a file-sharing 
service and provide the URL.

-Justin

-- 
==================================================

Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 629
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

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