[gmx-users] Point charges?

Mark Abraham mark.j.abraham at gmail.com
Tue Oct 4 08:44:52 CEST 2016


Hi,

Sure, they're evaluated every step, but they don't change from what you
used as input, so there's no reason to write them as output.

Mark

On Tue, Oct 4, 2016 at 8:33 AM Marko S <marksev1 at gmail.com> wrote:

> Thanks.
> So the charges dont get evaluated on every iteration of the molecular
> dynamics simulation?
>
> 3. okt. 2016 19.11 je oseba "Justin Lemkul" <jalemkul at vt.edu> napisala:
>
> >
> >
> > On 10/3/16 1:10 PM, Marko S wrote:
> >
> >> Hello everyone. Thanks for the software and hopefully for your help on
> >> advance.
> >>
> >> I'm a bit confused, since I can't find the answer in the manual. But
> where
> >> are the atom point charges written in which Gromacs output file? I need
> >> that data for further analysis of my system.
> >>
> >>
> > The topology.
> >
> > -Justin
> >
> > --
> > ==================================================
> >
> > Justin A. Lemkul, Ph.D.
> > Ruth L. Kirschstein NRSA Postdoctoral Fellow
> >
> > Department of Pharmaceutical Sciences
> > School of Pharmacy
> > Health Sciences Facility II, Room 629
> > University of Maryland, Baltimore
> > 20 Penn St.
> > Baltimore, MD 21201
> >
> > jalemkul at outerbanks.umaryland.edu | (410) 706-7441
> > http://mackerell.umaryland.edu/~jalemkul
> >
> > ==================================================
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